pLOT v1.0.3a is now released.  This update allows the customization of colors for primer labels as well as a number of minor fixes (listed in the change log section).

Known bugs with fixes are currently in the works:
 - Enzymes now show how many times they cut at selection time.
 - Improved overlap detection between labels in linear mode.
 - Fix linear arrow flood fill bug when arrow spans the origin.

Download Links
*To avoid possible errors, I recommend uninstalling any previous version and running the complete v1.0.3 installation.*

pLOT v1.0.3a Update
pLOT Sample Files
pLOT 1.0.1 Library Addon (Import through Library Manager)
pLOT Manual v1.0 (Very rough draft)

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*** Change history ***

v1.0.3a

• Changes made to primer label color in preferences now changes primer color in the display.
• Minor fix to graphics calculation that flattened the heads of arrows as they reached the 90° mark.
• Additional error check added to primer search routine.
• Changes to speed up the map drawing (may not be noticeable on faster computers with small sequences but will be noticeable with larger sequences and/or many primers/restriction sites).
• Fixed the Bp counter not rolling over in sequences spanning the origin.
• Fixed error in single-primer entry

v1.0.2b

• Fixes an error in the search routine that returned antisense matches at the wrong Bp.

v1.0.2

• Text boxes changed to accommodate larger sequences.
• Other "under the hood" changes and fixes

v1.0.1

• Addition of gaps in search strings
• Added Primer Manager

V1.0.0

• Initial release.